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Published: Jun 17, 2023 · Modified: Apr 11, 2025 by deliciouslyseasoned · · This post may contain affiliate links

Fluffy Pancake Muffins with Cream Cheese and Blueberries

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Pancake Muffins—are they breakfast or dessert? Simply put, they’re both! These fluffy pancake muffins are filled with sweet cream cheese and topped with blueberries, making them perfect for breakfast, dessert, or even a mid-day snack. No matter when you serve them, they’re a guaranteed hit for the whole family!

A pancake cup filled with cream cheese and blueberries.
Jump to:
  • Why You’ll Love This Recipe
  • Ingredients
  • Variations
  • How to Make Pancake Muffins
  • Storage Directions
  • Serving Suggestions
  • Expert Tips
  • Recipe FAQ
  • Try This Delicious Pancake Cup Recipe Today
  • More Delicious Breakfast Recipes
  • Blueberry and Cream Cheese Stuffed Pancake Muffins

Introducing on of the most brilliant breakfast inventions—Pancake Muffins! I started making these just a year ago, and they’ve quickly become a family favorite. Whether you grab them plain on the go, enjoy them with cream cheese and blueberries, or take them over the top with a drizzle of hot fudge and a sprinkle of powdered sugar, one bite and you’ll see why they’re so popular!

Simple and handheld, this easy recipe starts with baked buttermilk pancake muffins, then filled with a sweetened cream cheese mixture and topped with tart, juicy blueberries. And the best part? This entire pancake muffin recipe comes together in just 30 minutes!

Looking for more pancake recipes to add to your breakfast rotation? Try these Pancake Sausage Bites, strawberry Pancake Cups, or these Pumpkin Spice Pancakes next!

Why You’ll Love This Recipe

  • Easy to Make: Whip up a batch in 30 minutes or less with just a few simple steps. Perfect for novice bakers, busy mornings, and everything in between!
  • Best of Both Worlds: This pancake muffins recipe combines the light, fluffy texture of pancakes with the convenience of muffins. Each bite is packed with sweet cream cheese filling and fresh blueberries—all in a perfectly portioned, handheld package.
  • Endless Versatility: Whether you prefer sweet or savory, these pancake muffins can be customized to fit any craving. Enjoy them at home on a lazy Sunday morning or take them on the go for a quick and delicious breakfast!
A square white plate with two pancake muffins with fresh berries scattered around and on top.

Ingredients

  • Flour: Provides structure for the muffins and absorbs moisture during baking to create a soft, fluffy rise to the pancake batter muffins.
  • Sugars: Granulated sugar adds sweetness, aids in browning, and helps bind the ingredients together. Powdered sugar sweetens and thickens the cream cheese mixture for a smooth filling.
  • Leaveners and Salt: Baking powder and baking soda create air bubbles in the batter, allowing the muffins to rise. Salt enhances the overall taste, balancing the sweetness. Make sure your leavening agents are fresh (no older than 6 months)!
  • Egg: Adds richness, structure, and a slight density to the batter, helping the muffins hold their shape while baking.
  • Buttermilk: Reacts with the leavening agents to create a lighter, fluffier rise while adding a slight tangy flavor. Buttermilk is best for the fluff!
  • Cream Cheese: Provides a rich and tangy base while adding a smooth, creamy texture—perfect for a breakfast-dessert combo!
  • Cool Whip: Lightens the sweetened cream cheese mixture, adding volume and a fluffy consistency to the filling.

Scroll down to the recipe card for the full recipe with quantities of each one.

Variations

  • Homemade Whipped Cream: Swap Cool Whip for homemade whipped cream for a fresher, fluffier topping.
  • Healthier Option: Use protein pancake mix for added nutrition and make the filling with low-fat cream cheese for a lighter option.
  • Berry Swap: Instead of blueberries, swap in strawberries, blackberries, or raspberries for a different fruity flavor.
A pancake muffin filled with hot fudge, cream cheese and topped with blueberries that has a bite taken out of it.

How to Make Pancake Muffins

These pancake mini muffins are a winner for beginners! All it takes is a quick pancake batter, a simple cream cheese filling, and a few easy steps. Before you start, preheat your oven to 375°F, lightly grease a jumbo muffin pan, gather your ingredients and equipment, and follow these 5 steps:

  1. Step 1: Mix the Ingredients. Whisk together the dry ingredients—flour, granulated sugar, baking soda, baking powder, and salt—in a medium bowl and then set aside. In a separate small bowl, whisk the eggs and buttermilk until combined.
  2. Step 2: Make and Pour the Batter. Gently stir the wet ingredients into the dry ingredients until just combined. Pour ¼ cup of pancake batter into each muffin tin.
  3. Step 3: Bake and Press. Bake at 375°F for 15-20 minutes or until golden brown. Remove the pan from the oven and use the end of a small glass or shot glass to press down the center of each pancakes in the muffin tin to create a pocket. in the center.
  4. Step 4: Make the Cream Cheese Filling. Beat the cream cheese, in a medium bowl, until smooth and creamy. Gradually mix in the powdered sugar, then fold in the Cool Whip until fully combined.
  5. Step 5: Fill and Serve. Spoon the cream cheese mixture into each muffin, top with blueberries, and enjoy!

Storage Directions

  • Storing: For best results, store the pancake bites unfilled in an airtight container in the fridge for up to 3 days. For longer storage, freeze them for up to 1 month in a freezer-safe container, stacking them in single layers with parchment paper in between.
  • Reheating: Pop your muffin tin pancake bites in the microwave for 30-60 seconds, checking in intervals until warmed, so they stay soft and delicious! Then add the whipped cream and berries before serving.
Two pancake bites on a white plate.

Serving Suggestions

Whether you’re pairing them with a glass of milk, a hot cup of coffee, or a full savory breakfast spread, these muffin pan pancakes are a perfect fit! Here are some delicious ways to serve them and make your breakfast extra special:

  • Set up a fun DIY muffin bar with toppings like mini chocolate chips, sliced bananas, Nutella, or a drizzle of maple syrup.
  • Balance the sweetness by serving these pancake muffins alongside mini chicken biscuits, ham hashbrown casserole, or sausage gravy breakfast pizza.
  • Make them part of a decadent breakfast spread with pecan bread pudding, mini cherry pastries, or cherry cream cheese egg rolls.

Expert Tips

  • Leave the Batter Lumpy: DO NOT over-mix the pancake batter! A few lumps are needed to help keep the pancake muffin bites light and fluffy. Over-mixing creates gluten, leading to tough, rubbery pancakes.
  • Press While Warm: Press the muffins into cups immediately after baking while they’re still warm. This helps them hold their shape without tearing.
  • Fully Soften the Cheese: Make sure your cream cheese is fully softened before mixing to avoid lumps and achieve a smooth, creamy filling.
  • Time Saver Option: For a shortcut, use prepared pancake mix instead of making the batter from scratch.

Recipe FAQ

How do you know when these pancake muffins from scratch are done?

The toothpick test never fails! Just insert a toothpick or cake tester into the center of a muffin—if it comes out clean, they’re good to go. If not, put them back in the oven for a few more minutes and check again.

Can I make these muffins gluten-free?

Yes! Simply swap the flour for a gluten-free flour blend or use a gluten-free pancake mix for an easy alternative.

How do I prevent my pancake muffins from being too dense?

It’s simple—don’t overmix the batter! Stir until just combined, and don’t worry about lumps. Overmixing creates dense muffins instead of light and fluffy ones.

Can I make these muffins without egg?

Absolutely! Replace each egg with ¼ cup of unsweetened applesauce, mashed banana, or a flax egg (1 tablespoon flaxseed meal + 2.5 tablespoons water, let sit for 5 minutes).

A hand holding up a pancake muffin with a bite taken out of it.

Try This Delicious Pancake Cup Recipe Today

These pancake cups make a great breakfast, snack, or dessert, and they’re so easy to make. You can’t beat that combination! Give this recipe a try just once, and I know you’ll be making it again and again. With so much delicious flavor and so little effort, you just can’t say no to these!

More Delicious Breakfast Recipes

  • Hash Brown Breakfast Cups
  • Homemade Honey Buns
  • Three pieces of breakfast pastry stacked up on a plate.
    Sausage Egg and Cheese Crescent Ring
  • Blackberry Cream Cheese Puff Pastry

This homemade lemon blueberry cheesecake from Great Grub, Delicious Treats is creamy, flavorful and delicious. A delicious lemon cheesecake recipe with fresh blueberries swirled throughout.

If you try this recipe and love it, please be sure to leave a 5 ⭐️⭐️⭐️⭐️⭐️ rating below and comment! You can also pin it to save it for later. Also, you can follow us on Pinterest, Facebook, Instagram and YouTube. Remember to “like” or “follow” us on all social media.

Two pancake muffins on a white plate.

Blueberry and Cream Cheese Stuffed Pancake Muffins

These Pancake Muffins are a breakfast-meets-dessert treat the whole family will love! Sweet and fluffy, cream cheese-filled, and topped with blueberries—baked and ready in just 30 minutes.
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Course: Breakfast, brunch
Cuisine: American
Keyword: pancake bites, pancake muffins
Prep Time: 15 minutes minutes
Cook Time: 15 minutes minutes
Total Time: 30 minutes minutes
Servings: 12 Servings
Author: Deliciously Seasoned

Ingredients

Pancake Batter

  • 1 cup all purpose flour
  • 1 tablespoon sugar
  • ½ teaspoon baking soda
  • ½ teaspoon salt
  • ¼ teaspoon baking powder
  • 1 large egg
  • 1 cup buttermilk

Cream Cheese Mixture

  • 8 ounce cream cheese, room temperature
  • 1 cup powdered sugar
  • 8 ounce cool whip
  • Hot fudge topping, powdered sugar, fresh blueberries, optional

Instructions

  • Preheat the oven to 375 degrees and lightly spray a jumbo muffin pan with non-stick cooking spray.

Pancake Batter

  • In a medium bowl, whisk flour, sugar, baking soda, salt and baking powder together. Set aside.
  • In a small bowl, whisk egg and buttermilk together until combined.
  • Pour wet ingredients into dry ingredients and stir gently. Batter will be lumpy.
  • Pour ¼ cup of pancake batter into the prepared muffin pan.
  • Bake for 15-20 minutes or until done
  • Remove from the oven and using the end of a small glass or shot glass, press down in the center of each pancake.

Cream Cheese Mixture

  • In a medium bowl, beat cream cheese until smooth and creamy, 2-3 minutes.
  • Gradually add powdered sugar and beat until combined.
  • Add cool whip and stir until combined.
  • Drizzle hot fudge topping around the top of each pancake cup, optional.
  • Fill each pancake cup with cream cheese mixture, top with powdered sugar, blueberries and whipped cream, if desired.

Notes

  • DO NOT over-mix the pancake batter! A few lumps are needed to help keep the pancake muffin bites light and fluffy. Over-mixing creates gluten, leading to tough, rubbery pancakes.
  • Press the muffins into cups immediately after baking while they’re still warm. This helps them hold their shape without tearing.
  • Make sure your cream cheese is fully softened for easier mixing and a better consistency.
  • Use prepared pancake mix instead of making the batter from scratch if you need to save some time. 
A double collage photo of pancake cups with cream cheese and blueberries.
A three collage photo of pancake cups with hot fudge, cream cheese and blueberries.

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