In a large bowl, beat cream cheese, brown sugar, and granulated sugar together until smooth.
Pour heavy cream, pumpkin puree, and vanilla into cream cheese mixture and beat just until combined.
Add flour, cinnamon, pumpkin pie spice, ginger, nutmeg, and cloves. Stir to combine.
Add whisked eggs and mix just until combined.
Pour batter onto the prepared crust.
Bake for 1 hour 15 minutes.
Remove from the oven and top with brown sugar pecan topping.
Return to the oven and bake for an additional 15 minutes or until the cheesecake is mostly set but still a little jiggly.
Remove from the oven and let sit for an hour or so, then place in the refrigerator for 4+ hours or overnight until chilled.